Package: DNAtools 0.2-4.9001

DNAtools: Tools for Analysing Forensic Genetic DNA Data

Computationally efficient tools for comparing all pairs of profiles in a DNA database. The expectation and covariance of the summary statistic is implemented for fast computing. Routines for estimating proportions of close related individuals are available. The use of wildcards (also called F- designation) is implemented. Dedicated functions ease plotting the results. See Tvedebrink et al. (2012) <doi:10.1016/j.fsigen.2011.08.001>. Compute the distribution of the numbers of alleles in DNA mixtures. See Tvedebrink (2013) <doi:10.1016/j.fsigss.2013.10.142>.

Authors:Torben Tvedebrink [aut], James Curran [aut], Mikkel Meyer Andersen [aut, cre]

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DNAtools.pdf |DNAtools.html✨
DNAtools/json (API)
NEWS

# Install 'DNAtools' in R:
install.packages('DNAtools', repos = c('https://mikldk.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/mikldk/dnatools/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • dbExample - Simulated database with 1,000 individuals

On CRAN:

6.00 score 28 scripts 357 downloads 8 mentions 18 exports 6 dependencies

Last updated 2 years agofrom:2205017e9e. Checks:OK: 1 NOTE: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 07 2024
R-4.5-win-x86_64NOTENov 07 2024
R-4.5-linux-x86_64NOTENov 07 2024
R-4.4-win-x86_64NOTENov 07 2024
R-4.4-mac-x86_64NOTENov 07 2024
R-4.4-mac-aarch64NOTENov 07 2024
R-4.3-win-x86_64NOTENov 07 2024
R-4.3-mac-x86_64NOTENov 07 2024
R-4.3-mac-aarch64NOTENov 07 2024

Exports:convolvedbCollapsedbComparedbExpectdbSimulatedbVarianceestimatePDfreqEstoptim.relatednesspContribpContrib_locusplot.dbcompareplot.dbOptimPnm_allPnm_locusprint.dbcompareprint.dbOptimsimAlleleFreqs

Dependencies:multicoolRcppRcppParallelRcppProgressRsolnptruncnorm

Empirical testing of DNA match probabilities

Mikkel Meyer Andersen, James Michael Curran and Torben Tvedebrink

Rendered fromdb_vignette.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2022-03-17
Started: 2019-12-09

STR markers in forensic genetics

Mikkel Meyer Andersen, James Michael Curran and Torben Tvedebrink

Rendered fromdna_vignette.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2022-03-17
Started: 2019-12-09

On the exact distribution of the numbers of alleles in DNA mixtures

Mikkel Meyer Andersen, James Michael Curran and Torben Tvedebrink

Rendered fromnoa_vignette.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2020-03-01
Started: 2019-12-09